mirror of
https://github.com/bytecodealliance/wasm-micro-runtime.git
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27e7e160af
Upgrade the version of related toolkits: - upgrade llvm to 15.0 - upgrade wasi-sdk to 19.0 - upgrade emsdk to 3.1.28 - upgrade wabt to 1.0.31 - upgrade binaryen to 111 And upgrade the CI scripts, sample workload build scripts, Dockerfiles, and documents.
125 lines
3.1 KiB
Plaintext
125 lines
3.1 KiB
Plaintext
# Copyright (C) 2019 Intel Corporation. All rights reserved.
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# SPDX-License-Identifier: Apache-2.0 WITH LLVM-exception
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cmake_minimum_required (VERSION 3.14)
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project(bwa_wasm C)
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list(APPEND CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/../../cmake)
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################ dependencies ################
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find_package(Binaryen 111 REQUIRED)
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################ LIBZ ################
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set(LIBZ_SRC_DIR ${CMAKE_CURRENT_SOURCE_DIR}/../libz)
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add_library(z_wasm STATIC
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${LIBZ_SRC_DIR}/adler32.c
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${LIBZ_SRC_DIR}/compress.c
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${LIBZ_SRC_DIR}/crc32.c
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${LIBZ_SRC_DIR}/deflate.c
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${LIBZ_SRC_DIR}/gzclose.c
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${LIBZ_SRC_DIR}/gzlib.c
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${LIBZ_SRC_DIR}/gzread.c
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${LIBZ_SRC_DIR}/gzwrite.c
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${LIBZ_SRC_DIR}/infback.c
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${LIBZ_SRC_DIR}/inffast.c
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${LIBZ_SRC_DIR}/inflate.c
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${LIBZ_SRC_DIR}/inftrees.c
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${LIBZ_SRC_DIR}/trees.c
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${LIBZ_SRC_DIR}/uncompr.c
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${LIBZ_SRC_DIR}/zutil.c
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)
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set_target_properties(z_wasm PROPERTIES LINKER_LANGUAGE C)
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target_compile_definitions(z_wasm PRIVATE Z_HAVE_UNISTD_H _LARGEFILE64_SOURCE=1)
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target_compile_options(z_wasm
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PRIVATE
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-Wno-unused-function
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-Wno-unused-variable
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)
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target_include_directories(z_wasm
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PUBLIC
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${LIBZ_SRC_DIR}
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)
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################ BWA_WASM ################
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set(BWA_SRC_DIR ${CMAKE_CURRENT_SOURCE_DIR})
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set(BWA_SOURCE
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${BWA_SRC_DIR}/utils.c
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${BWA_SRC_DIR}/kthread.c
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${BWA_SRC_DIR}/kstring.c
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${BWA_SRC_DIR}/ksw.c
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${BWA_SRC_DIR}/bwt.c
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${BWA_SRC_DIR}/bntseq.c
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${BWA_SRC_DIR}/bwa.c
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${BWA_SRC_DIR}/bwamem.c
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${BWA_SRC_DIR}/bwamem_pair.c
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${BWA_SRC_DIR}/bwamem_extra.c
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${BWA_SRC_DIR}/malloc_wrap.c
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${BWA_SRC_DIR}/QSufSort.c
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${BWA_SRC_DIR}/bwt_gen.c
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${BWA_SRC_DIR}/rope.c
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${BWA_SRC_DIR}/rle.c
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${BWA_SRC_DIR}/is.c
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${BWA_SRC_DIR}/bwtindex.c
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${BWA_SRC_DIR}/bwashm.c
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${BWA_SRC_DIR}/bwase.c
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${BWA_SRC_DIR}/bwaseqio.c
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${BWA_SRC_DIR}/bwtgap.c
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${BWA_SRC_DIR}/bwtaln.c
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${BWA_SRC_DIR}/bamlite.c
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${BWA_SRC_DIR}/bwape.c
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${BWA_SRC_DIR}/kopen.c
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${BWA_SRC_DIR}/pemerge.c
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${BWA_SRC_DIR}/maxk.c
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${BWA_SRC_DIR}/bwtsw2_core.c
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${BWA_SRC_DIR}/bwtsw2_main.c
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${BWA_SRC_DIR}/bwtsw2_aux.c
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${BWA_SRC_DIR}/bwt_lite.c
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${BWA_SRC_DIR}/bwtsw2_chain.c
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${BWA_SRC_DIR}/fastmap.c
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${BWA_SRC_DIR}/bwtsw2_pair.c
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${BWA_SRC_DIR}/main.c
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)
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add_executable(${PROJECT_NAME} ${BWA_SOURCE})
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set_target_properties(${PROJECT_NAME} PROPERTIES OUTPUT_NAME bwa.wasm)
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target_compile_definitions(${PROJECT_NAME}
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PRIVATE
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USE_MALLOC_WRAPPERS
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__SSE__ __SSE2__ __SSE4_1__
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_WASI_EMULATED_MMAN _WASI_EMULATED_SIGNAL _WASI_EMULATED_PROCESS_CLOCKS
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)
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target_compile_options(${PROJECT_NAME}
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PRIVATE
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-Wno-unused-function
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-Wno-unused-variable
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-msimd128
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)
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target_link_options(${PROJECT_NAME}
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PRIVATE
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-Wno-unused-command-line-argument
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LINKER:--allow-undefined,--export=__heap_base,--export=__data_end
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LINKER:-z,stack-size=1048576
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)
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target_link_libraries(${PROJECT_NAME} z_wasm wasi-emulated-process-clocks)
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add_custom_target(bwa_wasm_opt ALL
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COMMAND
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${Binaryen_WASM_OPT} -Oz --enable-simd -o bwa.opt.wasm bwa.wasm
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BYPRODUCTS
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${CMAKE_CURRENT_BINARY_DIR}/bwa.opt.wasm
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WORKING_DIRECTORY
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${CMAKE_CURRENT_BINARY_DIR}
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)
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add_dependencies(bwa_wasm_opt ${PROJECT_NAME})
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